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Eitan Yaffe's home page
- Amos Tanay's group
- Department of Computer Science and Applied Mathematics
- Weizmann Institute of Science
- eitan.yaffe@weizmann.ac.il
- Amos Tanay's group
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I am a Phd. student at Amos Tanay's group, working on the associations between three-dimensional chromosomal structure, linear epigenetic marks and genome regulation.
Three-Dimensional Folding and Functional Organization Principles of the Drosophila Genome. Tom Sexton*, Eitan Yaffe*, Ephraim Kenigsberg, Frederic Bantignies, Benjamin Leblanc, Michael Hoichman, Hugues Parrinello, Amos Tanay, Giacomo Cavalli. Cell(2012)
Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture. Eitan Yaffe and Amos Tanay Nature Genetics(2011)
Comparative Analysis of DNA Replication Timing Reveals Conserved Large-Scale Chromosomal Architecture. Yaffe E, Farkash-Amar S, Polten A, Yakhini Z, Tanay A, Simon I. PLoS Genetics (2010)
Eitan Yaffe, Dan Halperin: Approximating the Pathway Axis and the Persistence Diagrams for a Collection of Balls in 3-Space. Discrete & Computational Geometry 44 (3): 660-685 (2008), and in the conference Symposium on Computational Geometry: 260-269 (2008)
Eitan Yaffe, Dan Fishelovitch, Haim J. Wolfson, Dan Halperin, Ruth Nussinov: MolAxis: a server for identification of channels in macromolecules. Nucleic Acids Research 36(Web-Server-Issue): 210-215 (2008)
Guy Laden, Paula Ta-Shma, Eitan Yaffe, Michael Factor, Shachar Fienblit: Architectures for Controller Based CDP. FAST 2007: 107-121
Dalit Naor, Petra Reshef, Ohad Rodeh, Allon Shafrir, Adam Wolman, Eitan Yaffe: Benchmarking and Testing OSD for Correctness and Compliance. Haifa Verification Conference 2005: 158-176
For corrected Human Lmphoblast Hi-C contact maps described in the paper "Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture" see this page.
For corrected Drosophila Hi-C contact maps described in the paper "Three-Dimensional Folding and Functional Organization Principles of the Drosophila Genome" see this page.