Tom Ran, Shai Kaplan & Ehud Shapiro, (2009), Molecular implementation of simple logic programs, Nature Nanotechnology, (published online on August 01, 2009) Nature Abstract

Yaakov Benenson, Binyamin Gil ,Uri Ben-Dor, Rivka Adar & Ehud Shapiro, (2004), An autonomous molecular computer for logical control of gene expression, Nature, 429, 423-429 (published online on April 28, 2004) Abstract, Full Text (pdf)

Benenson Y, Adar R, Paz-Elizur T, Livneh Z, Shapiro E (2003) DNA molecule provides a computing machine with both data and fuel, Proc. Natl. Acad. Sci. USA, Full Text (pdf)

Regev A, Shapiro E (2002) Cellular abstractions: Cells as computation, Nature 419, 343. Full text (pdf)

Benenson Y, Paz-Elizur T, Adar R, Keinan E, Livneh Z, Shapiro E (2001) Programmable and autonomous computing machine made of biomolecules. Nature 414, 430-434. Abstract. Full text (pdf)

Shapiro, E., Karunaratne, K.S.G. (2001) Method and system of computing similar to a Turing machine U.S.
Patent 6,266,569.